braino
* Address problem when accessing schema via GBrowse2 (override
_prepare() from mysql.pm driver)
* fixes bug #3238
updates for last two bug fixes
only add \x01 if prior line doesn't end in a space, fixes bug #3235
turn off explicit warnings for windows users (needs testing), refs #3215
Added Bio::SimpleAlign::consensus_conservation()
Tests for Bio::Simple::Align::consensus_conservation()
Merge pull request #16 from chadadavis/master

Bio::SimpleAlign::consensus_conservation(), along with tests.
compare evalue to the filter cutoff not to itsself
warn only when debugging is on
skip lines starting with hash comment
use SQLite instead of DB_File for storing the gi -> taxid
Implement write_feature() in FeatureIO::ptt
Merge branch 'master' of github.com:bioperl/bioperl-live
Added new module for creating simulated read from a reference sequence
Merge branch 'master' of github.com:bioperl/bioperl-live
Merge branch 'master' of github.com:bioperl/bioperl-live
Merge branch 'master' of github.com:bioperl/bioperl-live
Don't restrict just to CDS features, the feature may have some other primary tag
Merge branch 'master' of github.com:bioperl/bioperl-live