Avoid calling the maven-dependency-plugin for all builds

Only trigger the maven-dependency-plugin when the there's a full build or when the pom.xml is part of the incremental changes
Also, replace calls to deprecated methods and added tests to check that the maven-dependency-plugin is called or not (using the junit:junit:4.10
artifact instead of the plugin itself, which doesn't work unless it has been installed in the local repo at least once before)
Upgraded dependency to m2e plugins version 1.4.0 to be sure user have the new methods replacing the deprecated ones.

Upgrading version to 0.0.3.qualifier
Merge branch 'xcoulon-skip_incremental_builds'