Got 10B3 to match perfectly.  The trick was combining some groups with similar treatments.  Working on 10B4.
Tidying up 10B3, updating its documentation and saving its intermediate representation of the data
Determining confidence intervals and proving that I can reproduce these too, from my animal data reproduction
Refactoring libraries and helper scripts into util to reduce redundancy.  Also fixed a few miscellaneous errors which were blocking knitting
Beautification of the markdown rendering, so that table of contents is well formatted and section breaks look nice