SeasideBuildData script seems to be working.  Now submits the script
RunEvt2Cal with qsub and in the script it sets the paramters directory
then runs evt2cal
Merge branch 'master' of /user/e10003/R00TLe
Changed the skeleton main a little bit.  Now it looks through the
TChain and makes sure there is a settings object and then saves
them for each file.  So if there are two files it will save a
settings0 and a settings1.
Future plans include parsing the file name so it says something
like settingsFromRun390
Merge branch 'master' of /user/e10003/R00TLe

Has the small updates to the skelton histogramer involving
the Settings objects
New Logon splash screen.  Added logoffscript as well.  Updated
the R00TLeLogon.sh script to copy the logoff script as well.

Made the SeasdieBuildData.sh executable
Merge branch 'master' of /user/e10003/R00TLe
Added Corrections file for run 398.  Hopefully with the correct
jitters in it
Merge branch 'master' of /user/e10003/R00TLe
Added new Corrections file.  Added new branch to the channel class
Now it has Corrected cubic top/bottom time of flight.  Is using
the Cubic Fit times.

LendaChannel now holds the corrected cubic fit time of flight.

Lendabar uses the corrected cubic fit time of flight to make a
a top/bottom corrected cubic TOF variable.

LendaPacker now sets the corrected cubic time of flight for the
lendachannel in the ddaschannel2LendaChannel method

Changed build data script.  Now looks to see if there is a root
file with "RAW" in it.  If so it calls Raw2Cal instead of Evt2Cal

Added some new corrrections files for the jitters in runs 397,398
Added Cal2Cal.  Meant to Re-apply corrections to the file(work in progress)
Doesn't copy over the S800 information correctly.

LendaPacker now has a new method to repack the event.  Loops over every channel
for the bars in the event and calls repackchannel to apply different corrections
to the event.  Does not do anything to the object scintillators or the unmapped channels.
Changed the time corrections to a - instead of a +.
Corrected time = time-correctionShift
Ever Chainging the corrections file and such.  Added a line in Evt2Cal
that sets the file Map/Corrections file names in the packer.  Right now
it always sets "./Mapfile.txt" and "./Corrections.txt".  This method
was added to the packer so that the Cal2Cal could choose a specific
file.

The Make file was changed so that it builds Cal2Cal
Core make file now has the Evt2CalStatic.  Builds Evt2Cal with no
libraries so that it can be run with the profiler.  The common make
file has a .secondary line that preserves the intermediate .o files
during the building process.
Fixed the small bug in the main Evt2Cal unpacking loop. Before it
was
while (! feof(file) && !siganl_recived)

the EOF bit is not set until you reach the end of file and then try
to read once more.  So now it is
while(!signal_recived){
	read_total_size
if (feof(file)){
	break;
}

This is probably the source of the errors that were seen with multiple
segment runs.  When there was one file the last bit of the file was
the change of state end run information which is ignored so it being
read twice isn't a problem.  With two segments the last bit of the file
can be a physics event.  So if it tries to read again it will still
think it is a physics event and try to processs it and crash
Made the same fix to main unpacking loop in Evt2Raw
that was done for Evt2Cal