Successfully created cmdline_parser object. Beginning transition to the
object oriented version of the code. Added stdin.h to be included in all
files which will include namespace and stdio and other generic things
that only need to be included once.
completed destructor for cmdline_parser class. 
trying to make stdinc.h show up in the online repository
attempt in adding stdinc.h to repository online.
trying to add stdinc.h to github

again
added findKmerInclude to hold all configuration macros and library