Updated LDA API

Added TopicDocMatrix, TopicTermMatrix, TopicTopTerms, TopicTopDocs, TopicCovariance.
Recompiled CorpusWriter.jar
Import scripts now check for app/data/x (instead of app folder).
Updated Makefile to ensure CorpusWriter depends on the underlying *.java file.
Updated Core.py

Use 'origin' parameter.
Is now a parent class of all other APIs.
Updated Corpus API

Added TermProbs, TermCoProbs, TermPMI
Removed unused test.txt
Added TextSearch and Document to Corpus API.
Updated GroupInABox and CovariateChart APIs.