Fixed paths with more than one level of depth. By Karl.
Added compiler flags to fix luajit issues
Fixed Luajit build
Use xdg-open on linux systems
Fixed initproject script for merge of cmake branch into devel in AlloSystem
Merge branch 'master' of github.com:AlloSphere-Research-Group/AlloProject
Minor improvement in docs
Made submodules clone with one level of depth (i.e. don't clone the history)
Add missing /bin/bash at start of shell scripts
Fixed script
New fixes for all versions of git
Not clone the whole AlloSystem history again
New attempto get smaller Allosystem
Better management of submodules (not as submodules :) )
All submodules are now proper repos
Renamed buildandrun script to run.sh. Modified readme for this change
Minor changes to scripts
Minor improvements to scripts
Fixed interaction with new run system in AlloSystem.
Update install_all_dependencies.sh