Templates: GET templates doesn't honor the `flat_settings` parameter.

Close #6671
[TEST] Fix failure in SearchFieldsTests.testUidBasedScriptFields.

Sorting fails on unmapped fields so the new propagation delay of the mappings
exposed this issue. I added explicit mappings as part of index creation to fix it.
[TEST] Fix IndexLookupTests.testCallWithDifferentFlagsFails.