Changed tests to use fixtures, fixed bug w/ gene resource

Signed-off-by: Sheik Hassan <solergiga@yahoo.com>
Remove whitespace causing flake8 failure

Signed-off-by: Byron Ruth <b@devel.io>
Move Serrano session middleware above CSRF middleware

For token-based authentication using the Serrano API, the CSRF check
is exempted.

Signed-off-by: Byron Ruth <b@devel.io>
Fix broken paging

Fixes #326

Signed-off-by: Ryan O'Hara <oharar@email.chop.edu>
Merge pull request #335 from ryanjohara/issue-326

Fix broken paging
Reduce result template to include only data used by client

Remove following fields from result.js:
baseq_rank_sum
genotype_quality
haplotype_score
quality_by_depth
sample.batch
sample.count
variant.effects.codon_change
variant.effects.description
variant.effects.functional_class
variant.effects.region
variant.effects.transcript.gene.chr
variant.effects.transcript.gene.families
variant.effects.transcript.gene.id
variant.effects.transcript.gene.name
Fixes #239

Signed-off-by: Ryan O'Hara <oharar@email.chop.edu>
Merge pull request #275 from hassanNS/other_tests

Changed tests to use fixtures, fixed bug w/ gene resource
Revert "Merge pull request #275 from hassanNS/other_tests"

This reverts commit b68c507f9b928ce6e548bec74dbcd3476de133d0, reversing
changes made to ea35bab08bc2666d25aa09e5b17cb99627d03537.
Merge pull request #337 from cbmi/revert_pull_request_275

Revert "Merge pull request #275 from hassanNS/other_tests"
Remove unused variants management commands

Signed-off-by: Don Naegely <naegelyd@gmail.com>
Merge pull request #344 from cbmi/issue-301

Remove unused variants management commands
Merge pull request #336 from ryanjohara/issue-239

Reduce result template to include only data used by client
issue-322

Signed-off-by: Adam Wenocur <wenocur@email.chop.edu>
Merge pull request #341 from awenocur/issue-322

Update README with workaround for possible pip failure
Upgrade to Cilantro 2.2.34

Signed-off-by: Don Naegely <naegelyd@gmail.com>
Move QueueTestCase to tests.cases.base

Signed-off-by: Don Naegely <naegelyd@gmail.com>
Add missing sources and genes URL includes

Signed-off-by: Don Naegely <naegelyd@gmail.com>
Include gene templates via MANIFEST.in

Signed-off-by: Don Naegely <naegelyd@gmail.com>
Remove missing form field from gene set template

Signed-off-by: Don Naegely <naegelyd@gmail.com>
Update varify to leverage varify-data-warehouse

Signed-off-by: Don Naegely <naegelyd@gmail.com>