Changed nightly script run on Irina K's machine so that the Albany (tpetra branch)
from github is pulled instead of from software.
stop verifying until verify understands non-manifold
Fixing Heat2DMMCylWithSource/CMakeLists.txt file so tpetra test passes.
Beginning conversion of Albany tpetra branch examples to use Belos, instead of AztecOO.
Also did some cleanups / added some ifdefs.
Beginning conversion of Albany tpetra branch examples to use Belos, instead of AztecOO.
Also did some cleanups / added some ifdefs.
Continuing conversion of input files that use AztecOO to Belos.

Also converted Main_Analysis.cpp to Tpetra.  There is a runtime error
for TransientHeat1D that needs to be resolved still when run with AlbanyAnalysisT.
The error is:

p=0: *** Caught standard std::exception of type 'std::logic_error' :

 /home/ikalash/Trilinos_Albany/nightlyAlbanyTests/Results/Trilinos/build/install/lib/cmake/Trilinos/../../../include/Thyra_TpetraThyraWrappers_def.hpp:268:

 Throw number = 101

 Throw test that evaluated to true: true

 Error, the input mv = Thyra::DefaultSpmdMultiVector<double>{rangeDim=1,domainDim=1} does not support the Thyra::TpetraMultiVector or the Thyra::TpetraVector interfaces!
Edits to get more tests to pass with GO = long long.
Add a few more GO = long long tests.
Checking in Main_AnalysisT.cpp, which I forgot to check in yesterday.
Adding Tpetra versions of input files for problems that use MueLu.  There are not fully converted
yet as it isn't clear if all required options are available in MueLu.
Working through converting MueLu examples.  Turned Zoltan2 on in
Trilinos cmake script for Tpetra branch, which is needed for repartitioning.

Right now repartitinoing won't work with MueLu because the coordinates are not
passed properly to MueLu in Piro_NullSpaceUtils.cpp in the piro package of Trilinos.
Capabilities there need to be extended to pass the coordinates to MueLu when selecting
MueLu preconditioner.
More work on GO = long long test suite

118 Tpetra tests now pass!
update for change in scorec model api
Continuing conversion of examples that use MueLu to run with AlbanyT executable.
For most of these to run still need to add coordinates passing to Piro_NullSpaceUtils class
in piro for rebalancing.
Merge branch 'tpetra' of github.com:gahansen/Albany into tpetra
verify scorec mesh, works with non-manifold models
Add adaptive nightly test
using new scorec partition shrink call

The apfAlbany interface was made in
a bit of a rush, now it has moved
to the scorec parma package.
Cleanup a few tests.
removing no longer used debugMeshWrite calls