Remove $NTA reference

Supports https://github.com/numenta/nupic/issues/809.

This PR should be merged together with https://github.com/numenta/nupic/pull/917 (pip-installable). This is because `lib_cppregion.so` will be installed too. In the current implementation, this file is obtained from $NTA/lib.
I guess the code is not working like this, `stderr` is likely to be omitted by `OS::executeCommand()`, so you can't access to the error output?