Fix to CMake to get it to work with the static version of libsbml.  Have no idea what was wrong; had to start over with the libantimony CMake file to get it to work, then back-patched the original contents into this version.

Also, added fixes for the actual translator so that degenerate models would not crash the translator.
libsbml2matlab->sbml2matlab in many cases.
Initializing matlabOutput so that '-h' doesn't crash.
Merge pull request #6 from luciansmith/master

Fix to CMake to get it to work with the static version of libsbml.