Fixed a bug in saving residue index as attribute.
Set title and status message for each task. Replaced BundleContext
object by CyServiceRegistrar. Started logging some messages.
Added a workaround for an exception occurring when getting current
session...
Made the "clear selection" action work.
Warning/error messages are sent to the log.
Fixed a bug in AlignManager, changed some of the log messages from warn
to info, added RINlayout.
Fixed association of nodes considering submodels. Still need to fix this
in the generation of RINs.