Added help option in PlasmaGraph main menu and started working on the contents of the help manual
Finished implementing JavaHelp System
Finished help menu
Updated help manual content and created STD first draft's index
Merge branch 'master' into help_menu

Conflicts:
	.metadata/.log
	.metadata/.plugins/org.eclipse.core.resources/.safetable/org.eclipse.core.resources
	.metadata/.plugins/org.eclipse.e4.workbench/workbench.xmi
	.metadata/.plugins/org.eclipse.jdt.core/4164183904.index
	.metadata/.plugins/org.eclipse.jdt.core/nonChainingJarsCache
	.metadata/.plugins/org.eclipse.jdt.core/variablesAndContainers.dat
	.metadata/.plugins/org.eclipse.jdt.ui/OpenTypeHistory.xml
	.metadata/.plugins/org.eclipse.jdt.ui/dialog_settings.xml
	.metadata/.plugins/org.eclipse.ui.workbench/workingsets.xml
	plasmagraph/nbproject/private/private.xml
	plasmagraph/nbproject/project.properties
	plasmagraph/src/org/pvg/plasmagraph/controllers/MainController.java
	plasmagraph/src/org/pvg/plasmagraph/views/MainView.java