Undisabled un-failing tests
Switched to <> from "" gtest library headers
fix_basis signature changes and tests
Whoops, add_to_partition signature changes that didn't get picked up on until a clean recompile
Moved dotqc stuff into it's own files

Also touched some asserts.
Added input and output_wire lines to doqc

To track the information in .i and .o lines.
Current not parsed into circuits.