Committer: Lei Yan <lei@penguin.uthsc.edu>
On branch master
Committer: Lei Yan <lei@penguin.uthsc.edu>
On branch master
Added permutations to pyLMM
Merge /home/lei/gene
Committer: Lei Yan <lei@penguin.uthsc.edu>
On branch master
Merge /home/lei/gene
Added a validation that warns the user of the number of permutations for
pyLMM is more than 20 (due to speed)

Changed the port in the flask settings to 5002 due to adding the new
production server branch
Adding the port as a parameter to runserver; this should just be temporary until
I figure out how to get it to read the port from the config file instead

Using runserver.py instead of secure_server.py because of an error with the latter
that I haven't figured out how to fix yet

Improved the appearance of several of the tables
Found the problem that was causing several collections functions to not work
and fixed it
Fixed an error when there's no locus for mRNA expression traits