Update TODO
Standalone binary code. First commit.
Merge branch 'master' of https://github.com/angadps/LongReads
Update hapmut.cpp
Update hapmut.cpp
hapmut.cpp - Comments
Rename hmm.C to nb.C
Rename hmm.h to nb.h
nb.C - comments
Update makefile
Check for bam file index
Merge pull request #5 from angadps/master

Standalone binary code