modified mainToggledOnly to find isolated nodes, working on main3 to find connections of CC's of flip-graph
Created bipartite and calculated cost values in create_bipartite.cpp.\n Costs generated in testing_component_graph_normal.txt.\n other mail files useless now.\n Yet to check the validity of the results.\n Yet to calculate minFlip using costs
complete code for pancreatic dataset dataset except finding minflip. adding additional datasets now. Removing useless files
tried optimization algorithms for formulation 2
1) changed create_bipartite. removing edges from ppi that are insignificant in both normal and disease. \n 2)added file generate_cost_function.cpp
lost track. removed some bugs from code. added generate_cost_function.cpp to generate cost function from biptartite. added Pancreas / output/ cost.m to try ga on the cost function. added get_driver_nodes.cpp to obtain the list of nodes calculated as driver using the Genetic algorithm (ga)