git-svn-id: https://svn.code.sf.net/p/snpeff/code@1159 3341ced4-5d85-40e2-8a85-8d6cb0b68e6b
Support for huge deletions added (deletions over 1% of the chromosome).
Test case added.


git-svn-id: https://svn.code.sf.net/p/snpeff/code@1160 3341ced4-5d85-40e2-8a85-8d6cb0b68e6b
Merge remote-tracking branch 'upstream'