Experimental work, rewrite of considerable code and updated support for platypus
Major rewrite to simplify code and add support for 4 generation pedigrees, simplifies denovo criteria.
Adds partial support for Phasing and Identification of de novos in all trios in a 4 generation pedigree.
Basic gender filtering of ChrX results.
Add's Bayesian scoring for denovos based on Platypus paper.
Extracts Tri Nucleotide information.
Improves reporting of results.