Fix for issues 4 and 26
Moved statistics from rv-monitor to this
Improved line number output
Updated to latest version of rv-monitor JavaMOPIssues
Merge pull request #31 from runtimeverification/fixStatistics

Fix statistics
Initial implementation of agent generation.
Agent generation now cleans up after itself
More comments
Proper recursing and merging in rv-monitor
No longer copies in jar files
Made JavaMOP produce BaseAspect.aj and MANIFEST.MF, pulling jar locations from the classpath
Now expects all aspectJ jars to be on the CLASSPATH
Refactoring, new --baseaspect parameter
Added agent examples
Added agent example with multiple properties
Added more rigorous file closing