Merge pull request #5 from imcf/master

Fix minor typo.
POM: extend pom-fiji not pom-fiji-plugins
Remove unnecessary else clauses
Remove unnecessary semicolons
Add missing @Override annotations
Remove unnecessary casts
Organize imports
Remove dead code
gitignore: ignore Eclipse metadata files
Merge branch 'style-fixes'
Update to Bio-Formats 5.0.0 release

While the artifact organization was restructured, the API is unchanged.
POM: exclude erroneous gov.nih.imagej artifact

This version of ImageJ is obsolete and deprecated in favor of
net.imagej:ij. Furthermore, the fact that its artifactId is "imagej"
instead of "ij" causes both artifacts to appear on the classpath
simultaneously, which results in lots of duplicate classes at
incompatible versions. So it definitely needs to be excluded.
Fusion: display fusion in real time

When fusing blocks, an intermediate image will be displayed in real time
as the fused pixels are filled in. This should be helpful in determining
how much progress (if any) is actually being made during the fusion
process.

Only one time point/channel will be displayed at a time, and the
displayed image may not perfectly represent the final fused image - as
it will undergo rearrangement and post processing.

Note: as this does introduce operations per pixel during the fusion
process, this was benchmarked. On an 11 minute fusion, the time cost of
drawing the fusion in progress is < 20 seconds (under 3%).

Closes #8
Fusion: add displayFusion checkbox

Added a checkbox to allow enabling/disabling the display of in-progress
fusion during the stitching process.

Default vaule is false.
Merge pull request #11 from fiji/display_fusion

Adds option to display the fusion process in real time. Enabled/disabled via the Stitching GUI.
simplified the progress bar and the display, no synchronized blocks necessary anymore
added the option to display also to the pairwise stitching
increased the internal stitching version
reset of progress bar after stitching is done
Merge pull request #13 from fiji/simplifications

Simplifications