taxonomy is in the biom tables, but if we do want to store it in this db,
then we should really look at a hierarchical set of tables. (gg db right
now just stores the flat strings though, with semicolons)


On Wed, Apr 16, 2014 at 1:34 PM, adamrp <notifications@github.com> wrote:

> In qiita_db/util.py:
>
> > @@ -37,3 +37,13 @@ def get_datatypes(metadata_map):
> >              datatypes.append('varchar')
> >
> >      return datatypes
> > +
> > +
> > +def scrub_data(s):
>
> Yeah, that's a really good idea, as long as we don't need it e.g., for
> taxonomy string delimiters or similar values
> ... <#1456c0877f25a94e_>
> On Wed, Apr 16, 2014 at 12:42 PM, Daniel McDonald <
> notifications@github.com>wrote: In qiita_db/util.py: > @@ -37,3 +37,13 @@
> def get_datatypes(metadata_map): > datatypes.append('varchar') > > return
> datatypes > + > + > +def scrub_data(s): should we also scrub ";" -- Reply to
> this email directly or view it on GitHub<
> https://github.com/biocore/qiita/pull/29/files#r11699955> .
>
> --
> Reply to this email directly or view it on GitHub<https://github.com/biocore/qiita/pull/29/files#r11702515>
> .
>