move with_model cleanup code to finally block
Merge pull request #94 from jmuhlich/with_model

move with_model cleanup code to finally block
fix interpretation of compartment prefix syntax in BNG species blocks
Merge pull request #95 from jmuhlich/bng_compartment_updates

fix interpretation of compartment prefix syntax in BNG species blocks
builder.parameter updates estimate_params based on prior

After Jeremy's removal of the dependency on BayesSB (commit
7ac1d162ee6ba9cf8a3), the specification of whether to estimate
parameters in the builder is no longer indicated by the
estimate=True/False keyword argument, but rather by the "prior" kwarg.
This commit completes this change by populating the estimate_params
array based on whether the value for the prior kwarg is None or has been
given some value (presumably an instance of a bayessb.priors prior).