everything but assign_taxonomy working
next round of working tests
next batch of passers
more passing
another batch
next round of tests
another round
more files
merge conflict resolution
Merge branch 'master' of https://github.com/qiime/qiime into testcoderemove
all tests except assign taxonomy
forgot to add all_tests.py
changed MinimalFastqParser to fastq_parse form skbio.
changed cogent.parse.fastq import MinimalFastqParser as MinimalFastqParserCogent to skbio.parse.sequences import fastq_parse as fastq_parse.
addressing comments
deleted redunddant from s in import statements
Merge branch 'master' of https://github.com/qiime/qiime into testcoderemove
Fixed a few import errors.
dealing with merge conflits
Merge branch 'master' of https://github.com/qiime/qiime into testcoderemove