up
add ability to tune overlap removal -- also added mj overlap removal
remove line that doesn't work
update grid submit script
update tnt maker scripts and add test scripts
add test script
update grid submit
adding lxbatch functionality
update multiprocess/lxbatch stuff!
update multiprocess/lxbatch stuff!
add placeholder for helper script to submit python scripts to lxbatch
add run helper script to submit python to lxbatch queue more easily
add LSF directories to gitignore
fix submit script
add script to check output
add script to check output
add script to finalize output
add script to finalize output
fix check output script
make jobs smaller