nanshe/advanced_image_processing.py: Changed the merge_neuron_sets function to perform repeated merges of one large set repeatedly until there is no further merges are possible.
nanshe/advanced_image_processing.py: Changed condition on while loop in merge_neuron_sets to skip the case of a single neuron.
nanshe/expanded_numpy.py: Added the pair_dot_product function for when a dot product is needed between a matrix and itself.
nanshe/expanded_numpy.py: Added the function pair_dot_product_partially_normalized for calculating dot_product_partially_normalized between vectors from the same set.
nanshe/expanded_numpy.py: Added the function pair_dot_product_normalized for calculating dot_product_normalized between vectors in the same set.
nanshe/advanced_image_processing.py: Optimized distance calculations in merge_neuron_sets.