Bug 427123 - Copy profile files from org.eclipse.osgi

- Overwrite the profile files in the o.e.e.p2.publisher bundle with the
  profile files from org.eclipse.osgi. This is a low-risk workaround for
  bug 427123.

Bug: 427123 Stale profile files in org.eclipse.equinox.p2.publisher
Signed-off-by: Tobias Oberlies <tobias.oberlies@sap.com>
Bug 312069 Fix FileReader ignoring Throwable.

Signed-off-by: Timo Kinnunen <timo.kinnunen@gmail.com>