created new branch
testing
added option parser
option parser edits
option parser edits
option parser edits
option parser edits
created class for barcodes
created class for barcodes
created class for barcodes
created method for barcode id
created method for barcode id
created method for barcode id
created method for barcode id
created method for barcode id
created method for barcode id
created method for barcode id
added class for Illumina 4 read run
added R code to generate barcode table and add barcode processing of reads
modify gitignore