Invalid documentation removed.
Update meds examples.
comment out CMS rerun code.
Fix CMS sample.
Merge branch 'master' into doc-updates

Conflicts:
	test/fixtures/files/parse_gen_parse/generated/CCD_1_generated.json
	test/fixtures/files/parse_gen_parse/generated/CCD_1_generated_2.json

test/fixtures/files/parse_gen_parse/generated/CCD_1_generated_2_new.json
Gen Fixes.
Merge pull request #195 from amida-tech/doc-updates

Doc updates