Resolving some errors I had while Importing networks.
Accidental push of LocalFiles
Some minor changes to get the IP output to show up in the VTK file.
Finally figured out why physics weren't being applied correctly without a geometry.
Merge branch 'feature/James_is_back' into develop
Playing with the sidebar
Reversing the change to GenericPhysics
- self._geometry needs to be an empty list that is appended to.
- If the physics are not being attached properly by default then it needs to be fixed somewhere else.
Fixed loglevel in MatFile. Commented out occupancy updates in IP due to errors.
Merge branch 'develop' of https://github.com/PMEAL/OpenPNM into develop
Empty notebook, company commit check
Fixed Physics module for imported networks with no geometry.

It doesn't add 'all' to self._geometry, because self._geometry should be
[ ] in this case. But it adds this label locally.
If the user does not send any geometry to Physics module, it applies to
the entire network. Even if the geometry object has not been created,
the code works as long as the required geometrical data exist.
Revert "Fixed Physics module for imported networks with no geometry."

This reverts commit 8ec1b507837292ce03d765e4fba158a301f2942a.
Merge branch 'master' into develop

Conflicts:
	OpenPNM/Network/__Import__.py
Started updating examples
Added small method to Base for finding objects by type
- Also updated run script so it works now
Working on example for transport and boundary conditions
Merge branch 'develop' into Documentation

Conflicts:
	run_script.py
Lots of dox updates
Added individual property models to documentation
Added mode option to regenerate methods, allowing the ability to 'exclude' some properties from regeneration.