Modified generate_autoconf_files.sh to cheange to top-level directory.
Added initial version of DEVELOPER-NOTES
Merge branch 'dev' of https://github.com/ktchu/LSMLIB into dev
Updated .gitignore
Fixed minor bug in generate_autoconf_files.sh
Removed old mercurial files.
Added Makefiles and config files to .gitignore.
Added auto-generated Fortran files to .gitignore
Changes from pointers to boost pointers, files that now are on diffrent directories, head files thta dont exist anymore were excluded
Excluded <DIM> from some files, added using standard namespace std; on files
Changes on methods that call IntVect, default parameters were excluded on those calls.
Revert "Changes on methods that call IntVect, default parameters were excluded on those calls."

This reverts commit 5be7b23b267f2d9cceb3e327df23813aea56655c.