Initial commit
initial addition of files
added some addition ignores
finishing up import
cleaning up read_population to mimic builtin's as read.XXX
Got pies_on_map to mostly work and started cleaning up for submission by the end of the weekend.
Working on read.population but have to go back to fix problems in locus.R as well.
Redid the locus.R constructor for all cases and fixed percolated problems from that.  Back onto the manual.
removed as.matrix and made it into to_mv() instead
cleaning up
Getting some tests cleared up
ignore updaed
Updating the checks
Switching vignette builder
moving over to devtools for testing and documentation
Working on documentation
Added allelic.diversity function and allowed Fis to take both loci and data.frames
Added rarefaction & associated tests to the package for diversity estimations.
Added permute_ci() function for estimation of confidence intervals for individual and strata-level analyses.  Provides a bit more robustness for various analyses.
Working on vignette stuff, it just does not seem to be working that well.  Still not fixed but gotta move on.