Version bump to 0.2.0
Some refactoring to use samtools-2
Test counting snps between sequences now pass
snps_between_bams now work with samtools-2
fixed @bam_a to bam1 in smp_between_bams.rb
BFRs changed for samtools-2
Version bump to 0.2.1
Updated the calls for samtools-2
Merge branch 'samtools-2' of http://github.com/tgac/bioruby-polyploid-tools into samtools-2
Fixed gemfile
Some bugfixes for polymarker, using samtools2
Merge pull request #2 from TGAC/samtools-2

Samtools 2