commented out future code
refactored to allow appending of annotations separately
more from api
ignored mini_phyl for testing
ignored mini_phyl for testing
ignored mini_phyl for testing
added functionality to find head sha
passes gh_user and resource_id instead of branch name on write
ignored mini_system
Merge remote-tracking branch 'origin/local' into local

Conflicts:
	peyotl/phylesystem/git_workflows.py
phylesystem test file
refactored auth args
Checking out branches from sha
Checking out branches from sha-a
Merge remote-tracking branch 'origin/local' into local

Conflicts:
	peyotl/phylesystem/git_workflows.py
refactoring and testing of workflows
auth_info to delete func and sha of None
bootstrapping of mini test system
removed hardcoded parentsha
logging