Added check for file existence in '-ifd' and correct MIP name convention format
Mip.pl and intersectCollect.pl

- Added test for checking files in reference BAMs and intersectCollect master template (RD!) files
- Added test for sampleID containing “_”.
- Added sub for printing to MIPLOG and other FileHandle
- Fixed bug in intersectCollect causing CADD file entries to be incorrectly annotated
- Enabled five keys in intersectCollect
Added new master template using five keys
Minor changes
- Added MT annotations in Annovar
- Enabled automatic download for MT ensGene|refGene
bumped version
Merge branch 'release/v1.5.4'