Merge pull request #2 from numenta/master

Merge master@HEAD
batch rename to UpperCamelCase for #69 without replace include
rename all affected #include
rename CMake generated files for test_everything
rename the test header included
further rename the test header included
rename test object to pass `testeverything`
merge master and resolve conflicts
Merge https://github.com/numenta/nupic.core into issue-69-source-file-renaming
clean up gitignore
Netbeans project files to gitignore
Merge branch 'master' of https://github.com/numenta/nupic.core into issue-69-source-file-renaming
Fix .ttc style problem in Doxygen source browser
Improve documentation of Dimensions
Improve the documentation of Coordinate
Merge branch 'master' of https://github.com/numenta/nupic.core into issue-69-source-file-renaming
Improve Input doc(the first pass)
Make descriptions in  "Class List" and "File List" consistent
Merge pull request #83 from breznak/fix_netbeans

gitignore cleanup and ignore netbeans projects
Improve Output doc