expose more options from lladser_ci_series in lladser_ci
- add real tests for lladser_ci and lladser_pe using simulated data
fix function name and doc mismatch
lots of re-formatting to make nose-tests happy
Merge pull request #379 from jensreeder/lladser_test

Lladser test
udpates to readme
some typo fixes
Merge pull request #382 from gregcaporaso/readme-updates

udpates to readme
Merge branch 'master' into doc-theme-brah
Change Fork me logo color to match new theme