Continuing conversion of input files that use AztecOO to Belos.

Also converted Main_Analysis.cpp to Tpetra.  There is a runtime error
for TransientHeat1D that needs to be resolved still when run with AlbanyAnalysisT.
The error is:

p=0: *** Caught standard std::exception of type 'std::logic_error' :

 /home/ikalash/Trilinos_Albany/nightlyAlbanyTests/Results/Trilinos/build/install/lib/cmake/Trilinos/../../../include/Thyra_TpetraThyraWrappers_def.hpp:268:

 Throw number = 101

 Throw test that evaluated to true: true

 Error, the input mv = Thyra::DefaultSpmdMultiVector<double>{rangeDim=1,domainDim=1} does not support the Thyra::TpetraMultiVector or the Thyra::TpetraVector interfaces!