enhancement - increased the mem/walltime estimates a bit for some jobs that were occasionally failling on our torque system due to them exceeding the limits


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8684 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix - #2354 allow for specified parameter different than avg (e.g. individual) to be plotted

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8685 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
added test function

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8686 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - added (as of yet undocumented) method mean_thresholded for parcellations (only for matricial inputs and averaging across first dim)

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8687 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - increased waaltime/mem a bit to give tehm a bit more resources on torque


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8688 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
restructuring - don't call other test scripts from within a test script, those will be executed separately


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8689 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - partially reverted the change in revision 8680, in which ft_checkdata/hascoordsys was introduced. I noticed that quite a lot of test scripts use cfg.coordsys, and hence probably also a lot of user scripts. Furthermore, coordsys is not required in sourceplot, but will only be used if present.


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8690 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
restructuring - deprecated cfg.sourceunits, use cfg.grid.unit instead. Added a test script. See http://bugzilla.fcdonders.nl/show_bug.cgi?id=2355


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8691 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
restructuring - this one goes together with r8691, see http://bugzilla.fcdonders.nl/show_bug.cgi?id=2355


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8692 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - give warning if the estimate of the units is ambiguous


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8693 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
automatically synchronized identical files to revision 8693

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8694 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement - allow teh specification of channel and dipole moment units in ft_compute_leadfield, allow SI units to be enforced for the head model and subsequent forward modelling steps, general overhaul of unit handling in the code (get rid of cfg.sourceunits and cfg.mriunits), be more consistent with how units are being dealt with. This is a colelction of changes that relates to SPM12, for which we are working towards explicit handling of physical units throughout the analyses.


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8695 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
automatically synchronized identical files to revision 8695

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8696 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix - fixed bug related to units: I had changed cfg.siunits from a boolean into 'yes/no' for consistency, but forgot that it was used as boolean further down in the code. The consequence was that with siunits='no' the conversion to siunits was done nevertheless.


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8697 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix - don't try to convert the channel units between mm/cm/m if they are unknown


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8698 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
automatically synchronized identical files to revision 8698

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8699 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix - removed the dependence on cfg.sourceunits, convert the sens to the units of the vol (since the vol might contain a system matrix wjoch cannot be converted any more)


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8700 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix - be more consistent with moving cfg.sourceunits and cfg.tightgrid to cfg.grid sub-structure


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8701 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
enhancement-all t-tests pass t-statistic. see bug2360

git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8702 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0
bugfix - resolved dependency on compat/senslabel in planarchannelset


git-svn-id: svn+ssh://svn.fcdonders.nl/home/svnroot/fieldtrip/trunk@8703 0cf7c7f0-3615-4144-b4e6-68da3bce3cd0