Merge pull request #299 from teharrison/develop

bug fixes
Merge pull request #300 from teharrison/develop

update for solr schema
Merge pull request #301 from teharrison/develop

add numeric check
Merge pull request #302 from teharrison/develop

fix slor document
Merge pull request #303 from teharrison/develop

fix solr delete, merge solr commands into 1 document
Merge pull request #304 from teharrison/develop

fix for solr date requirements
Merge pull request #306 from teharrison/develop

 	fix for empty subsets
Merge pull request #309 from teharrison/develop

fix rna blat for assemebeld data
remove max sequence length limit
use genecalling and rna search dna sequence files as input for index_sim_seq
use array for sequence file input and cat them together
match query IDs between sims file and sequence file with coordinates
truncate rna search result sequence by matching positions