modify the distance function in assembly.geneticmap to be robust to outliers
allow individual maps to be weighted before building the consensus
allow weights to be incorporated in scaffold orientation in assembly.geneticmap
implement Iglewicz and Hoaglin's robust test for multiple outliers
use extreme function to be more robust to outliers in assembly.geneticmap
add dummy nodes at chr ends to assist scaffold ordering
use weighted average in orientation calculation in assembly.geneticmap
fix interface for algorithms.matrix.determine_signs()
seperate map anchoring code into assembly.allmaps
fix calculation of LG lengths in assembly.allmaps
use seed in algorithms.tsp to get deterministic output
streamline AGP and FASTA construction in assembly.allmaps.build()
only allow pivot maps to connect to dummy ends in assembly.allmaps
simplify distance calculation in assembly.allmaps
add algorithms.lpsolve.min_feedback_arc_set()
implement algorithms.graph.transitive_reduction()
add weighted version of in algorithms.graph.merge_paths()