Add create_sbatch_file function
piper node mode partial implementation
sbatch piper seqrun jobs. this is just horrible.
Change job checking for seqruns to use slurm
Remove template file
Merge pull request #9 from NationalGenomicsInfrastructure/master

Merge from NationalGenomicsInfrastructure
Merge pull request #10 from NationalGenomicsInfrastructure/master

Merge from NationalGenomicsInfrastructure
Merge pull request #111 from Galithil/master

fixed the logging
Merge from NGI upstream
Development TODO note
Change log_rotate to more generic file_rotate
Fix up sbatch code, add some needed info to the config file
Change argument order slightly in execute_command_line
Add delete methods for sample, libprep, seqrun
Add delete_existing option to creation_charon_entries_from_project
Various updates to switch Piper to sbatch mode / use scratch space for data
Convert SLURM job code to 0, 1, or None
Merge branch 'piper_node' of github.com:mariogiov/ngi_pipeline into piper_node
Update config files
Remove unneeded comments