Connected DIRQA with SqaredDifference CLI module.
DIRQA now calculates squared difference between reference and warped image. Output is shown on top of reference image with color changed to red.
Changed color node of squared difference to Rainbow
Added comment for output values
Added Jacobian subdirectory in CMakeList.txt
First version of working jacobian CLI filter
Added statistics to Jacobian Filter console output.
Add ctkCollapsipleButton for Squared Difference
Added VolumeLogic to CMakeList
1. Connected Jacobian Button to logic.
2. Added Jacobian button logic.
3. Repaired cloneVolume logic (need to insert new lines in CMake and add lines to qSlicerRegistrationQualityModule.cxx)
4. Changed outputVolume for SquaredDifference, Checkerboard and Jacobian - output Volume is now automaticaly generated.
5. Changed SetForegroundImage function. It sets background volume and opacity of the foreground volume.
6. Change SetForegroundImage in FalseColor, SquareDifference, Flicker and Jacobian.
Added SqrtFilter to get difference in HU not HU2
Added new level and window values for SquaredDifference
Removed Checkerboard and SquaredDifference Volumes - for now they remain in Node, will remove them, if everything works.
Added defult Enabled=False for all buttons. And logic to Enabled=True, when all apropriate volumes are loaded.
Changed checkerboard pattern to int from string (added slider to choose value)
Changed CheckerboardVolume name.
Changed description.
Changed values for window and level of Jacobian volume
Fixed SetForegroundImage logic and added check for vector volume in Jacobian.
Fixed the mean values and std for Squared Difference filter. Now the numbers are acctually displayed in window instead on the console.
I removed ITKstatistics filter form CLI module and implemented vtkImageAccumulation in Logic. Will do the same for Jacobian.
Fixed values for Jacobian - now they display in window (similar to Squared Difference)