Merge branch 'samplerank' of https://github.com/alextp/factorie
updating assertion in ForwardPos to account for the new command line option for comma separated file list
Fixed a bug where calling .value on a BooleanVariable gives a
  class-cast error
Merge pull request #88 from JackSullivan/merge-boolvar-fix

Fixed a bug where calling .value on a BooleanVariable gives a
New document annotator that can concatenate hyphenated tokens if they represent a single word
now works in place. name changed to dehyphenator
Added BIO to BILOU conversion, BILOUChunkTag, and BILOUChunkDomain
Merged in Factorie/Master
Making app.classify.backend more generic; now there is only one linear example and its efficient.
app.classify.backend: refactoring the training interface to make it more generic
Merge pull request #90 from alextp/refactor-backend-classify

Refactor backend classify
dehyphenator is now dehyphenating tokenizer since it itself tokenizes the document instead of taking as input a pre-tokenized doc
app.nlp.mention: fixing bug in parse based mention finding
app.nlp.lemma: fixing lower case lemmatizer to be consistent with its attributes
app.nlp.coref: fixing coref bug
Created Chain Chunker with BILOU encoding for conll 2000.
Merge branch 'master' of https://github.com/factorie/factorie
Commented out currently unused discrete evaluation and incorrectly labeled chunks
app.nlp.parse: adding an explicit bias to TransitionBasedParser (this should not break serialization, but testing is advised before merging)
changed sentence segmenter to not have an assertion that sentenceStart != sentenceEnd, but to only add a sentence if this condition is true. This addresses run time crashes I was getting