Merge pull request #34 from carlacummins/master

Efficiency update fixed
Merge pull request #35 from carlacummins/master

Fixed test Assembly.t
remove strict warnings and dumper
moose includes strict and warnings by default
remove unneeded calls to vrtrack modules
call linker as needed
include stats generator as needed
db package remove unused packages
base name not used
make path not used in pan genome
Merge pull request #36 from andrewjpage/optimise_pathfind

Optimise pathfind
Merge pull request #37 from carlacummins/master

Fixed minor assemblyfind stats bug
Merge pull request #38 from carlacummins/master

Added support for IVA assemblies
Merge pull request #39 from carlacummins/master

Updates to search file of samples
Merge pull request #40 from carlacummins/master

Removed debugging statements
Merge pull request #41 from carlacummins/master

Stats file fixes
lookup by library
move library test to end
Merge pull request #42 from andrewjpage/irodsfind_library

Irodsfind library
Merge pull request #43 from carlacummins/master

Stats file updates & bug fixes
Merged issues