Adding fixed depth prefix trie implementation, as part of read error correction work.
Merge pull request #268 from fnothaft/prefix-trie

Adding fixed depth prefix trie implementation
Use maven license plugin to ensure source has correct license
Merge pull request #278 from massie/license

Use maven license plugin to ensure source has correct license
Simplify format-source

Only create a single Maven instance, and provide multiple goals to it
Merge pull request #279 from genomebridge/simplify-format-source

Simplify format-source
New proposal for ADAMFeature
Added clarifying note to ADAMVariantContext
Merge pull request #274 from laserson/var-ctx-note

Added clarifying note to `ADAMVariantContext`
Implemented HTTPRangedByteAccess.

- HTTPRangedByteAccess supports HTTP range requests for ranges of
  resources. Includes a test that executes against a few bytes of the
  test mouse chromosome on the berkeley server.
- Added a new TestTags and moved the "NetworkConnected" ones into that
- Running the "networkconnected" profile as part of the Jenkins test
Merge pull request #277 from genomebridge/http-byte-access

Implemented HTTPRangedByteAccess.
Minor cleanup on interleaved FASTQ input format. Added dependency which is necessary for running downstream.
Merge pull request #282 from fnothaft/ifq-fix

Minor cleanup on interleaved FASTQ input format.
fix refname comment
Merge pull request #283 from hammerlab/refname-comment

Fix reference name comment
Removing ADAM format directory, and updating avro data file path and pom.xmls for bdg-formats move.
Merge pull request #280 from fnothaft/move-to-bdgformats

Move to bdg-formats
Cleaning up build warnings.
Merge pull request #284 from fnothaft/clean-warnings

Cleaning up build warnings.
Refactoring read groups to increase the amount of data stored.