fix auto-replace and array bounds bugs
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11807 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11808 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11809 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11810 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11811 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11812 f3b2605a-c512-4ea7-a41b-209d697bcdaa
fix bug with atom style variables on systems with empty domains
Merge branch 'lammps-icms' of bitbucket.org:akohlmey/lammps-icms into lammps-icms
a few more styles that should be affected by maxatom=0 by default
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms

Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
more cleanup
some more dead code removal. number of warnings getting small now