AMEC-2361
Updated httpclient from 4.2.1 to 4.3.3 to support try-with-resource statements in ambra-file-store.
Updated application context to work with content repo file store.
AMEC-2361
Updating Ambra to support ambra-file-store changes for splitting the FSIDMapper into classes for each backend.
License update
Merge branch 'master' into dev-AMEC-2361
Adding new permission for BAU-210
Refactoring a few things to support thesaurus visibility  in the web UI, BAU-210
License updates
updating filestore version
AMEC-2361
Incremented httpmime version to resolve conflicts in ambra-file-store.
License update and code cleanup
A fix for BAU-201, use all abstract nodes when sending data to the taxonomy server
Updating final release note
A bit of refactoring to use raw SQL for building up lists of articles for the browse page.  BAU-222
License updates
Adding javadoc BAU-222
Some cleanup, and turning unit tests back on, dev-BAU-222
Merge branch 'master' into dev-BAU-222
Another improvement.  This one speeds up the home page, BAU-222
Merge branch 'master' of github.com:PLOS/ambra into dev-AMEC-2361
Refactoring and some changes to improve our crossref citation searching, BAU-79