Kept only reads where cutadapt was executed on
Fixed bug with read2 input parameter.
Removed getopt argument parsing.
Changed description.
Fixed tool dependency owner typo.
Moved to rna_probing folder.
Removed getopt library import.
Renamed the R package.
Added tool requirements. Fixed command line.
Added GPL licence. Shaped up the code.
Added/edited help section.
Set tool version to 1.0.0
Fixed k2n file format.