Full split-fastq wip
Don't split fastq, just organize into directories.
Added "foreach" to run-command wrapper.  Needs testing.
foreach just refers to other parameter to use as iterator variable.
typo fix get_job_param() -> getjobparam()
Input is "reads" not "input"
Same bug, different place
Left debugging in by accident
debug print manifest_text
Debug manifest format to see why api server is rejecting it
Change collection create request
Simpler split-fastq, doesn't try to upload the collection, assume crunch-job
will create the collection for us.
Refactored and generalized list expansion, can use "foreach" to repeat portions
of the command line.
Fix syntax error
import stat
.st_mode
import copy
Set first task to success
Print traceback on exception
More logging