Started reading Gustafsson and Perhans 2008
Stylistic fixes
Add TODO and remove old files
Add Rproj to gitignore
Update Z project read in
Add code for generating Fig3
Update pdf generation specs
Update main text and add images
Add new resolution for Fig 1
Change fig 2 size
Change fig 3 size
Slight changes to pandoc specs
Add Fig3 resolutions
update